Integrated genomic, epigenomic, and expression analyses of ovarian cancer cell lines
Published in Cell Reports, 2018
Recommended citation: Papp E et al. (2018). "Integrated genomic, epigenomic, and expression analyses of ovarian cancer cell lines." Cell Reports. 25(9). http://rscharpf.github.io/files/Papp_et_al_CellReports_2018.pdf
This paper describes an approach for identifying somatic structural variants from tumor-only sequencing called trellis, and characterizes structural variants, epigenomic, and expression changes in a collection of 49 ovarian cancer cell lines.
Citation: bibtex
Software: trellis